Pairwise fitting pdb-2zz9 on pdb-1uon by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-1uon by gmfit(PID:4149456).

RANK[1] Corr.Coeff:0.431 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-1uon)
display:
color:
b'REOVIRUS POLYMERASE LAMBDA-3 LOCALIZED BY ELECTRON CRYOMICROSCOPY OF ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.431 0.415 0.406 0.405 0.399 0.391 0.387 0.382 0.380 0.379

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "1uon"(PDB-format) or "1uon"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.003641,-0.793580,0.608456 117.305864 center 0,0,0 model #1
    move 273.992704,251.237494,291.393684 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 1uon)] [Download the target GMM(pdb 2zz9)] [Download gmfit result file(4149456)]