Pairwise fitting pdb-2zz9 on pdb-1r2w by gmfit










Pairwise fitting of target pdb-2zz9 on reference pdb-1r2w by gmfit(PID:475935).





RANK[1] Corr.Coeff:0.660

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(pdb-1r2w)

display:



color:


b'COORDINATES OF L11 WITH 58NTS OF 23S RRNA FITTED INTO THE CRYO-EM MAP ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.660
0.646
0.637
0.630
0.627
0.626
0.626
0.622
0.617
0.597







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1r2w"(PDB-format) or 
 "1r2w"(mmCIF-format), and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.693632,-0.213075,-0.688095 134.833745 center 0,0,0 model #1
move -168.096784,-63.561331,-108.730954 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!