Pairwise fitting pdb-2zz9 on pdb-1jqt by gmfit










Pairwise fitting of target pdb-2zz9 on reference pdb-1jqt by gmfit(PID:623630).





RANK[1] Corr.Coeff:0.547

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(pdb-1jqt)

display:



color:


b'FITTING OF L11 PROTEIN IN THE LOW RESOLUTION CRYO-EM MAP OF E.COLI 70S' [Ngauss:18]



[Download the reference pdb]





Other Transformations
rank
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Corr.Coeff.
0.547
0.494
0.493
0.478
0.474
0.474
0.461
0.456
0.454
0.432







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1jqt"(PDB-format) or 
 "1jqt"(mmCIF-format), and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.991734,-0.117353,0.051889 99.950628 center 0,0,0 model #1
move -52.207631,157.868020,-107.901067 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!