Pairwise fitting pdb-2zz9 on pdb-1h6i by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-1h6i by gmfit(PID:4093254).

RANK[1] Corr.Coeff:0.832 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-1h6i)
display:
color:
b'A REFINED STRUCTURE OF HUMAN AQUAPORIN 1 ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.832 0.722 0.645 0.626 0.625 0.594 0.592 0.588 0.585 0.581

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "1h6i"(PDB-format) or "1h6i"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.004523,-0.048238,0.998826 58.510487 center 0,0,0 model #1
    move 35.467942,34.026939,-132.455426 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 1h6i)] [Download the target GMM(pdb 2zz9)] [Download gmfit result file(4093254)]