Pairwise fitting pdb-2zz9 on emdb-5925 by gmfit



Pairwise fitting of target pdb-2zz9 on reference emdb-5925 by gmfit(PID:4117394).

RANK[1] Corr.Coeff:0.409 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(emdb-5925)
display:
color:
3.6 Angstrom resolution MAVS filament generated from helical reconstruction, truncated map [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.409 0.379 0.378 0.377 0.375 0.374 0.369 0.366 0.366 0.357

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5925.map.gz", and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.951060,0.122120,-0.283852 149.726635 center 0,0,0 model #1
    move 78.782689,165.937375,144.789849 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 5925)] [Download the target GMM(pdb 2zz9)] [Download gmfit result file(4117394)]