Pairwise fitting pdb-2zz9 on emdb-1857 by gmfit










Pairwise fitting of target pdb-2zz9 on reference emdb-1857 by gmfit(PID:270174).





RANK[1] Corr.Coeff:0.547

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(emdb-1857)

display:



color:


Three dimensional cryo-EM reconstruction of the tetrameric barley NTRC resolved to 10A [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.547
0.534
0.521
0.504
0.504
0.501
0.500
0.497
0.497
0.489







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1857.map.gz", and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.103614,-0.503741,0.857618 62.305342 center 0,0,0 model #1
move 152.783474,44.727998,-41.225164 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1857)]

[Download the target GMM(pdb 2zz9)]

[Download gmfit result file(270174)]