Pairwise fitting pdb-2zz9 on emdb-1044 by gmfit










Pairwise fitting of target pdb-2zz9 on reference emdb-1044 by gmfit(PID:4163622).





RANK[1] Corr.Coeff:0.308

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(emdb-1044)

display:



color:


Structure and gating mechanism of the acetylcholine receptor pore. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.308
0.278
0.275
0.265
0.264
0.263
0.255
0.254
0.254
0.242







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1044.map.gz", and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.919165,-0.262838,0.293347 93.240027 center 0,0,0 model #1
move 125.890543,-65.970578,124.148630 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1044)]

[Download the target GMM(pdb 2zz9)]

[Download gmfit result file(4163622)]