Pairwise fitting pdb-1x18 on emdb-2274 by gmfit










Pairwise fitting of target pdb-1x18 on reference emdb-2274 by gmfit(PID:565791).





RANK[1] Corr.Coeff:0.379

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1x18)

display:



color:



b'CONTACT SITES OF ERA GTPASE ON THE THERMUS THERMOPHILUS 30S SUBUNIT   ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1x18)]







REFERENCE(emdb-2274)

display:



color:


human crm1 extended conformation [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.379
0.371
0.349
0.345
0.330
0.326
0.264
0.230
0.225
0.214







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2274.map.gz", and read it.

  2.  Download the Target molecule "1x18"(PDB-format) or
  "1x18"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.151495,-0.621518,-0.768612 160.282068 center 0,0,0 model #1
move 26.467675,42.310209,94.278339 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!