Pairwise fitting pdb-1p58 on pdb-5h32 by gmfit










Pairwise fitting of target pdb-1p58 on reference pdb-5h32 by gmfit(PID:4101041).





RANK[1] Corr.Coeff:0.496

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(pdb-5h32)

display:



color:


b'CRYO-EM STRUCTURE OF ZIKA VIRUS COMPLEXED WITH FAB C10 AT PH 5.0      ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.496
0.439
0.430
0.429
0.419
0.418
0.356
0.348
0.344
0.338







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5h32"(PDB-format) or 
 "5h32"(mmCIF-format), and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.075690,0.317818,0.945126 106.619530 center 0,0,0 model #1
move -224.025461,-218.310302,-303.754126 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 5h32)]

[Download the target GMM(pdb 1p58)]

[Download gmfit result file(4101041)]