Pairwise fitting pdb-1p58 on pdb-3c6r by gmfit










Pairwise fitting of target pdb-1p58 on reference pdb-3c6r by gmfit(PID:451412).





RANK[1] Corr.Coeff:0.626

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(pdb-3c6r)

display:



color:


b'LOW PH IMMATURE DENGUE VIRUS                                          ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.626
0.496
0.453
0.451
0.441
0.380
0.330
0.314
0.293
0.291







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3c6r"(PDB-format) or 
 "3c6r"(mmCIF-format), and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.921403,-0.376341,0.096873 10.429309 center 0,0,0 model #1
move 16.533525,34.197885,12.434013 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!