Pairwise fitting pdb-1p58 on emdb-5356 by gmfit










Pairwise fitting of target pdb-1p58 on reference emdb-5356 by gmfit(PID:4149895).





RANK[1] Corr.Coeff:0.000

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(emdb-5356)

display:



color:


Expansion Intermediates of the Bacteriophage phi6 Procapsid [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.000
0.000
0.000
0.000
0.000
0.000
0.000
0.000
0.000
0.000







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5356.map.gz", and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.996564,0.059279,0.057855 178.410056 center 0,0,0 model #1
move -0.913897,-29.710461,208.154095 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5356)]

[Download the target GMM(pdb 1p58)]

[Download gmfit result file(4149895)]