Pairwise fitting emdb-5372 on emdb-3013 by gmfit










Pairwise fitting of target emdb-5372 on reference emdb-3013 by gmfit(PID:4166492).





RANK[1] Corr.Coeff:0.739

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5372)

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Structural transitions in RCNMV revealing potential mechanism of RNA release (EGTA map) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5372)]







REFERENCE(emdb-3013)

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color:


Electron cryo-microscopy of Cowpea Mosaic Virus containing RNA-1 (CPMVb) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.739
0.737
0.733
0.732
0.730
0.729
0.728
0.727
0.726
0.726







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3013.map.gz", and read it.

  2.  Download the Target map "emd_5372.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.812084,0.416696,-0.408516 100.946394 center 0,0,0 model #1
move 200.962399,199.465614,201.355310 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3013)]

[Download the target GMM(emdb 5372)]

[Download gmfit result file(4166492)]