Pairwise fitting emdb-5372 on emdb-1433 by gmfit










Pairwise fitting of target emdb-5372 on reference emdb-1433 by gmfit(PID:4097117).





RANK[1] Corr.Coeff:0.716

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5372)

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Structural transitions in RCNMV revealing potential mechanism of RNA release (EGTA map) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5372)]







REFERENCE(emdb-1433)

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The three-dimensional structure of genomic RNA in bacteriophage MS2: implications for assembly. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.716
0.714
0.710
0.703
0.703
0.700
0.699
0.698
0.697
0.696







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1433.map.gz", and read it.

  2.  Download the Target map "emd_5372.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.351020,0.062806,-0.934259 140.256960 center 0,0,0 model #1
move 240.581313,233.018878,234.834520 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1433)]

[Download the target GMM(emdb 5372)]

[Download gmfit result file(4097117)]