Pairwise fitting emdb-5372 on emdb-1433 by gmfit



Pairwise fitting of target emdb-5372 on reference emdb-1433 by gmfit(PID:4097117).

RANK[1] Corr.Coeff:0.716 [JSmol] [Molmil]
TARGET(emdb-5372)
display:
color:
Structural transitions in RCNMV revealing potential mechanism of RNA release (EGTA map) [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-5372)]
REFERENCE(emdb-1433)
display:
color:
The three-dimensional structure of genomic RNA in bacteriophage MS2: implications for assembly. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.716 0.714 0.710 0.703 0.703 0.700 0.699 0.698 0.697 0.696

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1433.map.gz", and read it.
  2. Download the Target map "emd_5372.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.351020,0.062806,-0.934259 140.256960 center 0,0,0 model #1
    move 240.581313,233.018878,234.834520 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1433)] [Download the target GMM(emdb 5372)] [Download gmfit result file(4097117)]