Pairwise fitting emdb-5168 on pdb-4btq by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-4btq by gmfit(PID:189709).





RANK[1] Corr.Coeff:0.550

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-4btq)

display:



color:


b'COORDINATES OF THE BACTERIOPHAGE PHI6 CAPSID SUBUNITS FITTED INTO THE ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.550
0.491
0.479
0.474
0.447
0.406
0.393
0.385
0.240
0.239







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4btq"(PDB-format) or 
 "4btq"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.742431,-0.329511,0.583283 87.294433 center 0,0,0 model #1
move -46.051059,49.570455,220.562404 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!