Pairwise fitting emdb-5168 on pdb-4btg by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-4btg by gmfit(PID:4088104).





RANK[1] Corr.Coeff:0.581

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-4btg)

display:



color:


b'COORDINATES OF THE BACTERIOPHAGE PHI6 CAPSID SUBUNITS (P1A AND P1B)   ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.581
0.536
0.515
0.514
0.462
0.442
0.429
0.422
0.336
0.334







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4btg"(PDB-format) or 
 "4btg"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.143983,-0.681131,-0.717864 98.120677 center 0,0,0 model #1
move -24.588216,64.607332,157.182361 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 4btg)]

[Download the target GMM(emdb 5168)]

[Download gmfit result file(4088104)]