Pairwise fitting emdb-5168 on pdb-3zko by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-3zko by gmfit(PID:17821).





RANK[1] Corr.Coeff:0.471

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

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Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-3zko)

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color:


b"THE STRUCTURE OF ''BREATHING'' DENGUE VIRUS.                          " [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.471
0.423
0.423
0.405
0.374
0.374
0.357
0.345
0.274
0.233







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3zko"(PDB-format) or 
 "3zko"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.454620,0.887940,-0.069877 94.245002 center 0,0,0 model #1
move 28.961407,-22.334876,236.474312 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 3zko)]

[Download the target GMM(emdb 5168)]

[Download gmfit result file(17821)]