Pairwise fitting emdb-5168 on emdb-8091 by gmfit










Pairwise fitting of target emdb-5168 on reference emdb-8091 by gmfit(PID:220962).





RANK[1] Corr.Coeff:0.524

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(emdb-8091)

display:



color:


Cryo-EM structure of GluA2/3 AMPA receptor heterotetramer (model II) [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.524
0.458
0.456
0.433
0.422
0.417
0.394
0.383
0.233
0.219







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8091.map.gz", and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.607375,-0.502126,0.615601 107.776544 center 0,0,0 model #1
move 147.856453,146.530762,139.751410 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!