Pairwise fitting emdb-5168 on emdb-5488 by gmfit










Pairwise fitting of target emdb-5168 on reference emdb-5488 by gmfit(PID:491843).





RANK[1] Corr.Coeff:0.531

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(emdb-5488)

display:



color:


Rotavirus VP6 protein [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.531
0.515
0.513
0.510
0.510
0.505
0.498
0.478
0.400
0.387







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5488.map.gz", and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.936042,-0.313390,0.160035 169.853327 center 0,0,0 model #1
move 122.415189,-0.293331,320.426862 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!