Pairwise fitting emdb-5168 on emdb-3425 by gmfit










Pairwise fitting of target emdb-5168 on reference emdb-3425 by gmfit(PID:4171377).





RANK[1] Corr.Coeff:0.586

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

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Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(emdb-3425)

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Electron cryo-microscopy of human P-glycoprotein: ATP bound - closed conformation [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.586
0.578
0.570
0.562
0.555
0.530
0.528
0.522
0.356
0.343







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3425.map.gz", and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.987072,-0.155211,0.039978 174.086183 center 0,0,0 model #1
move 156.631710,156.318711,155.020013 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3425)]

[Download the target GMM(emdb 5168)]

[Download gmfit result file(4171377)]