Pairwise fitting emdb-5168 on emdb-3136 by gmfit










Pairwise fitting of target emdb-5168 on reference emdb-3136 by gmfit(PID:910448).





RANK[1] Corr.Coeff:0.544

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

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color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(emdb-3136)

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color:


A Single Alpha Helix Drives Extensive Remodeling of the Proteasome Lid and Completion of Regulatory Particle Assembly [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.544
0.465
0.463
0.462
0.455
0.443
0.433
0.412
0.222
0.219







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3136.map.gz", and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.863743,-0.463196,0.198488 161.889264 center 0,0,0 model #1
move 10.667033,-1.073644,-2.230617 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!