Pairwise fitting emdb-5111 on emdb-5469 by gmfit










Pairwise fitting of target emdb-5111 on reference emdb-5469 by gmfit(PID:4186553).





RANK[1] Corr.Coeff:0.466

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5111)

display:



color:



Feline panleukopenia virus in complex with FAb from neutralizing antibody MAb E [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5111)]







REFERENCE(emdb-5469)

display:



color:


Dynamics in Cryo EM Reconstructions Visualized with Maximum-Likelihood Derived Variance Maps [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.466
0.465
0.460
0.460
0.459
0.458
0.457
0.456
0.455
0.454







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5469.map.gz", and read it.

  2.  Download the Target map "emd_5111.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.964478,0.161757,0.208845 168.351446 center 0,0,0 model #1
move -0.771213,0.084098,-0.606949 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5469)]

[Download the target GMM(emdb 5111)]

[Download gmfit result file(4186553)]