Pairwise fitting emdb-5111 on emdb-5133 by gmfit










Pairwise fitting of target emdb-5111 on reference emdb-5133 by gmfit(PID:4175965).





RANK[1] Corr.Coeff:0.547

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5111)

display:



color:



Feline panleukopenia virus in complex with FAb from neutralizing antibody MAb E [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5111)]







REFERENCE(emdb-5133)

display:



color:


17 angstrom of wild Rabbit Hemorrhagic DiseaseVirus core-like particle cryomicroscopy structure [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.547
0.521
0.516
0.515
0.512
0.512
0.512
0.509
0.509
0.509







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5133.map.gz", and read it.

  2.  Download the Target map "emd_5111.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.292190,-0.491518,-0.820387 175.106849 center 0,0,0 model #1
move 0.152542,-0.020160,0.801210 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5133)]

[Download the target GMM(emdb 5111)]

[Download gmfit result file(4175965)]