Pairwise fitting emdb-5111 on emdb-2108 by gmfit



Pairwise fitting of target emdb-5111 on reference emdb-2108 by gmfit(PID:4128402).

RANK[1] Corr.Coeff:0.598 [JSmol] [Molmil]
TARGET(emdb-5111)
display:
color:
Feline panleukopenia virus in complex with FAb from neutralizing antibody MAb E [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-5111)]
REFERENCE(emdb-2108)
display:
color:
HRV2 empty 135S particle [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.598 0.589 0.589 0.588 0.587 0.586 0.586 0.584 0.584 0.580

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2108.map.gz", and read it.
  2. Download the Target map "emd_5111.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.787192,0.129329,0.602994 167.315896 center 0,0,0 model #1
    move 232.465507,231.796400,229.637729 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 2108)] [Download the target GMM(emdb 5111)] [Download gmfit result file(4128402)]