Pairwise fitting emdb-5111 on emdb-2108 by gmfit










Pairwise fitting of target emdb-5111 on reference emdb-2108 by gmfit(PID:4128402).





RANK[1] Corr.Coeff:0.598

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5111)

display:



color:



Feline panleukopenia virus in complex with FAb from neutralizing antibody MAb E [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5111)]







REFERENCE(emdb-2108)

display:



color:


HRV2 empty 135S particle [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.598
0.589
0.589
0.588
0.587
0.586
0.586
0.584
0.584
0.580







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2108.map.gz", and read it.

  2.  Download the Target map "emd_5111.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.787192,0.129329,0.602994 167.315896 center 0,0,0 model #1
move 232.465507,231.796400,229.637729 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2108)]

[Download the target GMM(emdb 5111)]

[Download gmfit result file(4128402)]