Pairwise fitting emdb-5111 on emdb-1145 by gmfit










Pairwise fitting of target emdb-5111 on reference emdb-1145 by gmfit(PID:389885).





RANK[1] Corr.Coeff:0.758

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5111)

display:



color:



Feline panleukopenia virus in complex with FAb from neutralizing antibody MAb E [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5111)]







REFERENCE(emdb-1145)

display:



color:


The structure of the poliovirus 135S cell entry intermediate at 10-angstrom resolution reveals the location of an externalized polypeptide that binds to membranes. [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.758
0.750
0.749
0.748
0.744
0.742
0.741
0.740
0.738
0.738







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1145.map.gz", and read it.

  2.  Download the Target map "emd_5111.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.179659,0.654462,-0.734440 21.586842 center 0,0,0 model #1
move 0.616888,-1.279074,1.105558 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!