Pairwise fitting emdb-5034 on emdb-6389 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-6389 by gmfit(PID:315698).





RANK[1] Corr.Coeff:0.489

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

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color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-6389)

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color:


Electron cryo-microscopy of AP-1:Arf1:Nef open trimer [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.489
0.486
0.479
0.463
0.428
0.416
0.408
0.401
0.257
0.253







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6389.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.019197,0.005767,-0.999799 114.345500 center 0,0,0 model #1
move -92.197975,232.219633,-182.916118 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!