Pairwise fitting emdb-5034 on emdb-6259 by gmfit



Pairwise fitting of target emdb-5034 on reference emdb-6259 by gmfit(PID:4089540).

RANK[1] Corr.Coeff:0.498 [JSmol] [Molmil]
TARGET(emdb-5034)
display:
color:
Structure of a type IV secretion system core complex [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-5034)]
REFERENCE(emdb-6259)
display:
color:
ERE-DNA/ERalpha/SRC-3/p300 complex with antibody [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.498 0.483 0.479 0.479 0.415 0.403 0.403 0.403 0.395 0.323

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_6259.map.gz", and read it.
  2. Download the Target map "emd_5034.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.895659,-0.313461,-0.315496 115.247894 center 0,0,0 model #1
    move -276.208821,-141.101547,41.937595 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 6259)] [Download the target GMM(emdb 5034)] [Download gmfit result file(4089540)]