Pairwise fitting emdb-5034 on emdb-5791 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-5791 by gmfit(PID:916176).





RANK[1] Corr.Coeff:0.502

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

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Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-5791)

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Cryo-electron microscopy of an immature 50S ribosomal subunit (45S particle) from Bacillus subtilis depleted of RbgA (YlqF), conformation 3 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.502
0.457
0.438
0.401
0.377
0.372
0.367
0.365
0.355
0.354







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5791.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.112037,0.925267,0.362392 143.608662 center 0,0,0 model #1
move 191.053066,-147.856758,236.096537 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5791)]

[Download the target GMM(emdb 5034)]

[Download gmfit result file(916176)]