Pairwise fitting emdb-5034 on emdb-5791 by gmfit



Pairwise fitting of target emdb-5034 on reference emdb-5791 by gmfit(PID:4058899).

RANK[1] Corr.Coeff:0.502 [JSmol] [Molmil]
TARGET(emdb-5034)
display:
color:
Structure of a type IV secretion system core complex [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-5034)]
REFERENCE(emdb-5791)
display:
color:
Cryo-electron microscopy of an immature 50S ribosomal subunit (45S particle) from Bacillus subtilis depleted of RbgA (YlqF), conformation 3 [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.502 0.457 0.438 0.401 0.377 0.372 0.367 0.365 0.355 0.354

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5791.map.gz", and read it.
  2. Download the Target map "emd_5034.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.112037,0.925267,0.362392 143.608662 center 0,0,0 model #1
    move 191.053066,-147.856758,236.096537 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 5791)] [Download the target GMM(emdb 5034)] [Download gmfit result file(4058899)]