Pairwise fitting emdb-5034 on emdb-2198 by gmfit



Pairwise fitting of target emdb-5034 on reference emdb-2198 by gmfit(PID:4094017).

RANK[1] Corr.Coeff:0.393 [JSmol] [Molmil]
TARGET(emdb-5034)
display:
color:
Structure of a type IV secretion system core complex [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-5034)]
REFERENCE(emdb-2198)
display:
color:
Architecture of human translation initiation factor 3 [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.393 0.383 0.354 0.330 0.330 0.324 0.322 0.313 0.236 0.219

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2198.map.gz", and read it.
  2. Download the Target map "emd_5034.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.276445,-0.140066,-0.950768 51.972800 center 0,0,0 model #1
    move -209.854031,48.393829,-229.681320 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 2198)] [Download the target GMM(emdb 5034)] [Download gmfit result file(4094017)]