Pairwise fitting emdb-5034 on emdb-2033 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-2033 by gmfit(PID:356965).





RANK[1] Corr.Coeff:0.334

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-2033)

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color:


Unsymmetrized reconstruction of the FLNa16-21 rod2 segment bound with integrin Beta7 subunit tail [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.334
0.277
0.238
0.238
0.230
0.230
0.227
0.224
0.208
0.180







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2033.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.839514,0.308654,0.447157 177.002700 center 0,0,0 model #1
move 161.222093,175.612987,200.378781 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!