Pairwise fitting emdb-5034 on emdb-1833 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-1833 by gmfit(PID:4165954).





RANK[1] Corr.Coeff:0.494

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-1833)

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color:


Drosophila melanogaster CMG complex - APO [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.494
0.479
0.471
0.446
0.395
0.338
0.333
0.333
0.316
0.298







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1833.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.036635,-0.983110,0.179313 164.948765 center 0,0,0 model #1
move 212.709347,-134.310351,174.551221 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1833)]

[Download the target GMM(emdb 5034)]

[Download gmfit result file(4165954)]