Pairwise fitting emdb-5034 on emdb-1817 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-1817 by gmfit(PID:4191449).





RANK[1] Corr.Coeff:0.395

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

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color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-1817)

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color:


Structure of S. cerevisiae anaphase promoting complex with the co-activator Cdh1 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.395
0.376
0.376
0.365
0.362
0.356
0.338
0.335
0.289
0.286







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1817.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.022866,-0.651712,0.758122 178.628454 center 0,0,0 model #1
move 173.965799,197.044648,142.113786 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1817)]

[Download the target GMM(emdb 5034)]

[Download gmfit result file(4191449)]