Pairwise fitting emdb-1975 on pdb-4uqq by gmfit










Pairwise fitting of target emdb-1975 on reference pdb-4uqq by gmfit(PID:140510).





RANK[1] Corr.Coeff:0.573

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1975)

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color:



Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1975)]







REFERENCE(pdb-4uqq)

display:



color:


b'ELECTRON DENSITY MAP OF GLUK2 DESENSITIZED STATE IN COMPLEX WITH 2S,  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.573
0.507
0.491
0.490
0.433
0.419
0.418
0.384
0.371
0.359







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4uqq"(PDB-format) or 
 "4uqq"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1975.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.660050,0.352715,0.663269 170.304602 center 0,0,0 model #1
move 18.875103,251.654197,50.697706 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!