Pairwise fitting emdb-1975 on pdb-3j0c by gmfit










Pairwise fitting of target emdb-1975 on reference pdb-3j0c by gmfit(PID:4109361).





RANK[1] Corr.Coeff:0.402

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1975)

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Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1975)]







REFERENCE(pdb-3j0c)

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color:


b'MODELS OF E1, E2 AND CP OF VENEZUELAN EQUINE ENCEPHALITIS VIRUS TC-83 ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.402
0.389
0.369
0.361
0.345
0.345
0.340
0.338
0.337
0.315







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j0c"(PDB-format) or 
 "3j0c"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1975.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.910087,-0.085229,0.405559 131.465312 center 0,0,0 model #1
move -141.538169,361.398086,-439.387044 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 3j0c)]

[Download the target GMM(emdb 1975)]

[Download gmfit result file(4109361)]