Pairwise fitting emdb-1975 on pdb-2xfb by gmfit










Pairwise fitting of target emdb-1975 on reference pdb-2xfb by gmfit(PID:674911).





RANK[1] Corr.Coeff:0.448

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1975)

display:



color:



Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1975)]







REFERENCE(pdb-2xfb)

display:



color:


b'CHIKUNGUNYA E1 E2 ENVELOPE GLYCOPROTEINS FITTED IN SINDBIS VIRUS CRYO-' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.448
0.437
0.434
0.431
0.413
0.412
0.396
0.378
0.374
0.337







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2xfb"(PDB-format) or 
 "2xfb"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1975.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.310152,0.125525,-0.942364 91.564742 center 0,0,0 model #1
move -240.162181,224.997016,143.247145 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!