Pairwise fitting emdb-1975 on emdb-8008 by gmfit










Pairwise fitting of target emdb-1975 on reference emdb-8008 by gmfit(PID:4060162).





RANK[1] Corr.Coeff:0.567

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1975)

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Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1975)]







REFERENCE(emdb-8008)

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color:


Combined Body and arm regions of the yeast spliceosomal U4/U6.U5 tri-snRNP by masked classification and refinement-Class 1 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.567
0.504
0.501
0.497
0.491
0.482
0.469
0.455
0.454
0.403







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8008.map.gz", and read it.

  2.  Download the Target map "emd_1975.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.769599,0.072426,-0.634407 50.823973 center 0,0,0 model #1
move 58.543096,366.785998,44.987286 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 8008)]

[Download the target GMM(emdb 1975)]

[Download gmfit result file(4060162)]