Pairwise fitting emdb-1975 on emdb-2175 by gmfit



Pairwise fitting of target emdb-1975 on reference emdb-2175 by gmfit(PID:4130954).

RANK[1] Corr.Coeff:0.438 [JSmol] [Molmil]
TARGET(emdb-1975)
display:
color:
Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1975)]
REFERENCE(emdb-2175)
display:
color:
Negative stain electron microscopy of a CSN(dCsn5)-SCF~Nedd8/Skp2/Cks1 complex [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.438 0.432 0.411 0.363 0.339 0.335 0.310 0.292 0.279 0.271

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2175.map.gz", and read it.
  2. Download the Target map "emd_1975.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.019600,0.750132,-0.660998 125.671874 center 0,0,0 model #1
    move 74.890534,424.616121,483.590081 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 2175)] [Download the target GMM(emdb 1975)] [Download gmfit result file(4130954)]