Pairwise fitting emdb-1936 on emdb-5953 by gmfit



Pairwise fitting of target emdb-1936 on reference emdb-5953 by gmfit(PID:4136230).

RANK[1] Corr.Coeff:0.777 [JSmol] [Molmil]
TARGET(emdb-1936)
display:
color:
N42 Rabbit Hemorrhagic Disease Virus (RHDV) T3 capsid [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1936)]
REFERENCE(emdb-5953)
display:
color:
Cryo-electron microscopy of iron-core lacking encapsulin nanocompartments from Myxococcus xanthus [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.777 0.772 0.766 0.761 0.758 0.755 0.754 0.753 0.753 0.752

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5953.map.gz", and read it.
  2. Download the Target map "emd_1936.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.872969,0.264432,-0.409878 96.222774 center 0,0,0 model #1
    move -0.653353,1.906669,0.528382 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 5953)] [Download the target GMM(emdb 1936)] [Download gmfit result file(4136230)]