Pairwise fitting emdb-1936 on emdb-3269 by gmfit










Pairwise fitting of target emdb-1936 on reference emdb-3269 by gmfit(PID:16659).





RANK[1] Corr.Coeff:0.788

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1936)

display:



color:



N42 Rabbit Hemorrhagic Disease Virus (RHDV) T3 capsid [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1936)]







REFERENCE(emdb-3269)

display:



color:


Importin-beta can bind Hepatitis B Virus core protein and empty core-like particles and induce structural changes [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.788
0.785
0.782
0.780
0.779
0.778
0.778
0.777
0.776
0.775







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3269.map.gz", and read it.

  2.  Download the Target map "emd_1936.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.329858,0.909976,0.251272 124.714600 center 0,0,0 model #1
move 290.451626,287.617677,288.647335 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3269)]

[Download the target GMM(emdb 1936)]

[Download gmfit result file(16659)]