Pairwise fitting emdb-1936 on emdb-1945 by gmfit










Pairwise fitting of target emdb-1936 on reference emdb-1945 by gmfit(PID:40801).





RANK[1] Corr.Coeff:0.862

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1936)

display:



color:



N42 Rabbit Hemorrhagic Disease Virus (RHDV) T3 capsid [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1936)]







REFERENCE(emdb-1945)

display:



color:


Feline Calicivirus strain F9 decorated with Junctional Adhesion Molecule A [Ngauss:20]



[Download the reference map]





Other Transformations
rank
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Corr.Coeff.
0.862
0.855
0.853
0.852
0.851
0.848
0.848
0.847
0.847
0.847







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1945.map.gz", and read it.

  2.  Download the Target map "emd_1936.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.000514,-0.000343,1.000000 176.151491 center 0,0,0 model #1
move -1.645050,-0.591562,-1.416768 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1945)]

[Download the target GMM(emdb 1936)]

[Download gmfit result file(40801)]