Pairwise fitting emdb-1936 on emdb-1945 by gmfit



Pairwise fitting of target emdb-1936 on reference emdb-1945 by gmfit(PID:4105410).

RANK[1] Corr.Coeff:0.862 [JSmol] [Molmil]
TARGET(emdb-1936)
display:
color:
N42 Rabbit Hemorrhagic Disease Virus (RHDV) T3 capsid [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1936)]
REFERENCE(emdb-1945)
display:
color:
Feline Calicivirus strain F9 decorated with Junctional Adhesion Molecule A [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.862 0.855 0.853 0.852 0.851 0.848 0.848 0.847 0.847 0.847

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1945.map.gz", and read it.
  2. Download the Target map "emd_1936.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.000514,-0.000343,1.000000 176.151491 center 0,0,0 model #1
    move -1.645050,-0.591562,-1.416768 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1945)] [Download the target GMM(emdb 1936)] [Download gmfit result file(4105410)]