Pairwise fitting emdb-1908 on pdb-4bot by gmfit










Pairwise fitting of target emdb-1908 on reference pdb-4bot by gmfit(PID:365831).





RANK[1] Corr.Coeff:0.675

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1908)

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Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1908)]







REFERENCE(pdb-4bot)

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color:


b'THE STRUCTURE AND SUPER-ORGANIZATION OF ACETYLCHOLINE RECEPTOR- RAPSYN' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.675
0.637
0.587
0.565
0.528
0.510
0.461
0.458
0.455
0.424







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4bot"(PDB-format) or 
 "4bot"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1908.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.445947,0.886404,0.124179 152.891033 center 0,0,0 model #1
move 331.666117,187.498280,434.287362 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 4bot)]

[Download the target GMM(emdb 1908)]

[Download gmfit result file(365831)]