Pairwise fitting emdb-1908 on pdb-4boo by gmfit



Pairwise fitting of target emdb-1908 on reference pdb-4boo by gmfit(PID:4096916).

RANK[1] Corr.Coeff:0.675 [JSmol] [Molmil]
TARGET(emdb-1908)
display:
color:
Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1908)]
REFERENCE(pdb-4boo)
display:
color:
b'THE STRUCTURE AND SUPER-ORGANIZATION OF ACETYLCHOLINE RECEPTOR-RAPSYN ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.675 0.644 0.574 0.565 0.526 0.512 0.467 0.436 0.424 0.421

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4boo"(PDB-format) or "4boo"(mmCIF-format), and read it.
  2. Download the Target map "emd_1908.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.782216,0.588680,-0.203947 165.165858 center 0,0,0 model #1
    move 99.951784,216.623099,440.854273 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 4boo)] [Download the target GMM(emdb 1908)] [Download gmfit result file(4096916)]