Pairwise fitting emdb-1908 on pdb-3j15 by gmfit










Pairwise fitting of target emdb-1908 on reference pdb-3j15 by gmfit(PID:182787).





RANK[1] Corr.Coeff:0.540

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1908)

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Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1908)]







REFERENCE(pdb-3j15)

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color:


b'MODEL OF RIBOSOME-BOUND ARCHAEAL PELOTA AND ABCE1                     ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.540
0.475
0.471
0.468
0.454
0.453
0.427
0.395
0.388
0.375







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j15"(PDB-format) or 
 "3j15"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1908.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.456139,0.757478,0.467081 154.219652 center 0,0,0 model #1
move -97.516911,-129.445617,-97.244451 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!