Pairwise fitting emdb-1908 on pdb-3j0e by gmfit










Pairwise fitting of target emdb-1908 on reference pdb-3j0e by gmfit(PID:4099829).





RANK[1] Corr.Coeff:0.616

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1908)

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Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1908)]







REFERENCE(pdb-3j0e)

display:



color:


b'MODELS FOR THE T. THERMOPHILUS RIBOSOME RECYCLING FACTOR AND THE E.   ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.616
0.542
0.512
0.464
0.462
0.461
0.424
0.403
0.392
0.364







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j0e"(PDB-format) or 
 "3j0e"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1908.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.945322,0.082004,0.315660 133.538790 center 0,0,0 model #1
move 155.345444,188.373200,336.514773 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 3j0e)]

[Download the target GMM(emdb 1908)]

[Download gmfit result file(4099829)]