Pairwise fitting emdb-1908 on pdb-2wwa by gmfit










Pairwise fitting of target emdb-1908 on reference pdb-2wwa by gmfit(PID:4102353).





RANK[1] Corr.Coeff:0.559

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1908)

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Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1908)]







REFERENCE(pdb-2wwa)

display:



color:


b'CRYO-EM STRUCTURE OF IDLE YEAST SSH1 COMPLEX BOUND TO THE YEAST 80S   ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.559
0.529
0.521
0.499
0.457
0.457
0.436
0.426
0.420
0.414







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2wwa"(PDB-format) or 
 "2wwa"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1908.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.822880,-0.506848,-0.256853 110.437658 center 0,0,0 model #1
move 151.790917,142.649897,-85.200178 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 2wwa)]

[Download the target GMM(emdb 1908)]

[Download gmfit result file(4102353)]