Pairwise fitting emdb-1908 on emdb-1108 by gmfit



Pairwise fitting of target emdb-1908 on reference emdb-1108 by gmfit(PID:4134179).

RANK[1] Corr.Coeff:0.571 [JSmol] [Molmil]
TARGET(emdb-1908)
display:
color:
Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1908)]
REFERENCE(emdb-1108)
display:
color:
Structural basis of pore formation by the bacterial toxin pneumolysin. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.571 0.555 0.546 0.534 0.435 0.412 0.393 0.388 0.375 0.359

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1108.map.gz", and read it.
  2. Download the Target map "emd_1908.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.457880,-0.504484,-0.732012 34.488991 center 0,0,0 model #1
    move -58.871901,132.271696,-173.602604 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1108)] [Download the target GMM(emdb 1908)] [Download gmfit result file(4134179)]