Pairwise fitting emdb-1908 on emdb-1108 by gmfit










Pairwise fitting of target emdb-1908 on reference emdb-1108 by gmfit(PID:4099751).





RANK[1] Corr.Coeff:0.571

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1908)

display:



color:



Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1908)]







REFERENCE(emdb-1108)

display:



color:


Structural basis of pore formation by the bacterial toxin pneumolysin. [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.571
0.555
0.546
0.534
0.435
0.412
0.393
0.388
0.375
0.359







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1108.map.gz", and read it.

  2.  Download the Target map "emd_1908.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.457880,-0.504484,-0.732012 34.488991 center 0,0,0 model #1
move -58.871901,132.271696,-173.602604 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1108)]

[Download the target GMM(emdb 1908)]

[Download gmfit result file(4099751)]