Pairwise fitting emdb-1849 on pdb-4v77 by gmfit










Pairwise fitting of target emdb-1849 on reference pdb-4v77 by gmfit(PID:334084).





RANK[1] Corr.Coeff:0.954

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1849)

display:



color:



Cognate 70S-TC complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1849)]







REFERENCE(pdb-4v77)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.954
0.775
0.772
0.742
0.740
0.735
0.734
0.721
0.721
0.718







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v77"(PDB-format) or 
 "4v77"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1849.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.795364,-0.190157,0.575531 135.257661 center 0,0,0 model #1
move 178.029829,183.197336,192.115060 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!