Pairwise fitting emdb-1849 on pdb-4v6l by gmfit










Pairwise fitting of target emdb-1849 on reference pdb-4v6l by gmfit(PID:4090096).





RANK[1] Corr.Coeff:0.946

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1849)

display:



color:



Cognate 70S-TC complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1849)]







REFERENCE(pdb-4v6l)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.946
0.762
0.759
0.759
0.733
0.728
0.724
0.722
0.715
0.708







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v6l"(PDB-format) or 
 "4v6l"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1849.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.185581,0.889599,0.417341 0.932718 center 0,0,0 model #1
move -0.622069,0.959929,-0.271083 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 4v6l)]

[Download the target GMM(emdb 1849)]

[Download gmfit result file(4090096)]