Pairwise fitting emdb-1849 on emdb-5125 by gmfit










Pairwise fitting of target emdb-1849 on reference emdb-5125 by gmfit(PID:4101729).





RANK[1] Corr.Coeff:0.965

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1849)

display:



color:



Cognate 70S-TC complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1849)]







REFERENCE(emdb-5125)

display:



color:


PSRP1 is not a bona fide ribosomal protein, but a stress response factor [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.965
0.948
0.730
0.710
0.702
0.700
0.693
0.683
0.668
0.657







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5125.map.gz", and read it.

  2.  Download the Target map "emd_1849.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.701903,-0.712268,-0.002683 179.763763 center 0,0,0 model #1
move 175.617345,177.615489,174.581042 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5125)]

[Download the target GMM(emdb 1849)]

[Download gmfit result file(4101729)]