Pairwise fitting emdb-1836 on emdb-8397 by gmfit










Pairwise fitting of target emdb-1836 on reference emdb-8397 by gmfit(PID:1292869).





RANK[1] Corr.Coeff:0.638

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1836)

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color:



Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1836)]







REFERENCE(emdb-8397)

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In situ structures of the genome and genome-delivery apparatus in ssRNA bacteriophage MS2 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.638
0.635
0.632
0.632
0.631
0.630
0.630
0.630
0.629
0.627







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8397.map.gz", and read it.

  2.  Download the Target map "emd_1836.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.596365,0.739697,0.311763 167.508737 center 0,0,0 model #1
move -180.604292,-230.719622,-3.481513 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!