Pairwise fitting emdb-1836 on emdb-6395 by gmfit



Pairwise fitting of target emdb-1836 on reference emdb-6395 by gmfit(PID:4111183).

RANK[1] Corr.Coeff:0.721 [JSmol] [Molmil]
TARGET(emdb-1836)
display:
color:
Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1836)]
REFERENCE(emdb-6395)
display:
color:
Structure of Ljungan virus: insight into picornavirus packaging [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.721 0.716 0.714 0.714 0.714 0.713 0.712 0.711 0.710 0.709

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_6395.map.gz", and read it.
  2. Download the Target map "emd_1836.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.999037,0.008499,-0.043040 130.651242 center 0,0,0 model #1
    move 79.594428,488.917749,231.798898 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 6395)] [Download the target GMM(emdb 1836)] [Download gmfit result file(4111183)]